HLab:Rscripts

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Miscellaneous R Scripts

Quantile normalization

This can be used directly or as an example.  It takes an input and output file names (tab-delimited files with header and row names).  It is set up for RNA and adds 1.1 to the expression levels to avoid zeros before taking the log2(normalized expr). Media:normalize.r

Scatter plots for replicates

PCA

GEDI