HLab:Rscripts
From CCGB
Miscellaneous R Scripts
Quantile normalization
- This can be used directly or as an example. It takes an input and output file names (tab-delimited files with header and row names). It is set up for RNA and adds 1.1 to the expression levels to avoid zeros before taking the log2(normalized expr). Media:normalize.r
Scatter plots for replicates
PCA
GEDI
