SLab:Todo

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Miscellaneous

The following list is in no particular order.

  • Migrate linne to bx network.
  • Migrate Schuster Lab machines to bx network.
    • Or at least, install AFS client.
  • Automate the archiving of sequencing run directories.
    • Maybe after two weeks in staging they're moved into the archive?
  • Test suspending user jobs in Sun Grid Engine.
    • Use Xen or something so user jobs can be stopped and not just suspended.
    • User jobs could be suspended to allow signal processing jobs to run immediately.
  • Combine linne and persephone clusters.
  • Come up with some backup solution.
  • Replace BioTeam iNquiry
    • Use Galaxy instead?
  • Implement a centralized database of sequencing run information.
    • Basically a small LIMS.
    • Maybe use Galaxy?
  • After problems with md1k-2 are fixed, turn on automated scrubbing.
  • Look into different storage systems.
  • clean up old files in /afs/bx.psu.edu/depot/data/schuster_lab/old_stuff_to_cleanup