Difference between revisions of "WWWGLS: Spring 2017"
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(→Schedule for Weekly Wednesday Wartik Genomics Lecture Series and Related Events: Spring Semester 2017) |
(→Schedule for Weekly Wednesday Wartik Genomics Lecture Series and Related Events: Spring Semester 2017) |
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!Topic | !Topic | ||
|- | |- | ||
| − | | Wed Jan 18 | + | | <span style="white-space: nowrap">Wed Jan 18 </span> |
| − | | Siyang Zheng<br>(Penn State University)<br>(Hosted by: The Center for Medical Genomics) | + | | Siyang Zheng<br>(Penn State University)<br>(Hosted by: The Center for Medical Genomics with videoconference connection to Hershey room CG628) |
| Title: NGS for Liquid Biopsy – Analyses of Single Circulating Tumor Cells and Extracellular Vesicles from Blood Samples of Cancer Patients | | Title: NGS for Liquid Biopsy – Analyses of Single Circulating Tumor Cells and Extracellular Vesicles from Blood Samples of Cancer Patients | ||
|- | |- | ||
| Wed Jan 25 | | Wed Jan 25 | ||
| Shefali Setia and Bo Zhang<br>(Penn State University) | | Shefali Setia and Bo Zhang<br>(Penn State University) | ||
| − | | Title: | + | | Title: Identifying genetic associations with variability in metabolic health and blood count laboratory values: Diving into the quantitative traits by leveraging longitudinal data from an EHR and Epigenetic Regulation in T-ALL by Ikaros |
|- | |- | ||
| Wed Feb 1 | | Wed Feb 1 | ||
| − | | | + | | Marzia Cremona<br>(Penn State University) |
| − | | Title: | + | | Title: Functional Motif Discovery for “Omics” Curves |
|- | |- | ||
| Wed Feb 8 | | Wed Feb 8 | ||
| − | | A. Murat Eren<br>(The University of Chicago) | + | | A. Murat Eren<br>(The University of Chicago)<br>(Co-hosted by The Microbiome Center) |
| − | | Title: | + | | Title: Genome-resolved metagenomics: A perfect mixture of opportunities and challenges |
|- | |- | ||
| Wed Feb 15 | | Wed Feb 15 | ||
| − | | | + | | Kasper Daniel Hansen<br>(Institution: Johns Hopkins University) |
| − | | Title: | + | | Title: DNA methylation and chromatin accessibility in the normal human brain |
|- | |- | ||
| Wed Feb 22 | | Wed Feb 22 | ||
| Thanh Le and Bruce Chen<br>(Penn State University) | | Thanh Le and Bruce Chen<br>(Penn State University) | ||
| − | | Title: | + | | Title: Gut Microbiome Dynamics Under Differentially Fatty Diets AND Investigating L1 Transposition with Functional Data Analysis |
|- | |- | ||
| Wed Mar 1 | | Wed Mar 1 | ||
| − | | Ben Langmead<br>( | + | | Ben Langmead<br>(Johns Hopkins University) |
| − | | Title: | + | | Title: Unlocking sequence data archives with scalable software and resources |
|- | |- | ||
| Wed Mar 15 | | Wed Mar 15 | ||
| − | | Michael DeGiorgio<br>(Penn State University)<br>(Hosted by: The Center for Medical Genomics) | + | | Michael DeGiorgio<br>(Penn State University)<br>(Hosted by: The Center for Medical Genomics with videoconference connection to Hershey room CG628) |
| − | | Title: | + | | Title: Uncovering regions of ancestral positive selection with ancient and modern DNA |
|- | |- | ||
| Wed Mar 22 | | Wed Mar 22 | ||
| − | | Arjun Krishnan<br>( | + | | Arjun Krishnan<br>(Michigan State University) |
| − | | Title: | + | | Title: "Nobody knew health and disease could be so complicated” - Some integrative data-driven insights into underlying genetic mechanisms |
|- | |- | ||
| Wed Mar 29 | | Wed Mar 29 | ||
| − | | Naomi Yamada<br>(Penn State University) | + | | Naomi Yamada and Samarth Rangavittal<br>(Penn State University) |
| − | | Title: | + | | Title: Characterizing DNA-protein crosslinking points and binding sub-types in ChIP-exo and Assembly and analysis of Y-linked data from great apes |
| + | |- | ||
| + | | Fri Mar 31 | ||
| + | | <font color=red>'''SPECIAL SEMINAR'''</font><br>Marc S Greenblatt<br>(University of Vermont College of Medicine) | ||
| + | | Title: Pathogenic or Not? Classifying Genetic Variants in Lynch Syndrome by Integrating In Vitro, Computational, and Other Evidence<br>(<font color=red>'''LOCATION/TIME: 501 Wartik Lab, 3:00pm - 4:00pm'''</font>) | ||
|- | |- | ||
| Mon Apr 3 | | Mon Apr 3 | ||
| Jean-Luc Jannink<br>(Cornell University)<br>(Co-hosted with Department of Plant Biology) | | Jean-Luc Jannink<br>(Cornell University)<br>(Co-hosted with Department of Plant Biology) | ||
| − | | Title: | + | | Title: Genomic Selection and Purging Genetic Load in Cassava, An Outcrossing Clonally Ropagated Crop<br>(<font color=red>'''LOCATION/TIME: 108 Wartik Lab, 12:10 - 1:10pm'''</font>) |
|- | |- | ||
| Wed Apr 5 | | Wed Apr 5 | ||
| − | | | + | | Ross Hardison<br>(Penn State University) |
| − | | Title: | + | | Title: Validated Systematic Integration of epigenomic data in hematopoiesis |
|- | |- | ||
| Wed Apr 12 | | Wed Apr 12 | ||
| Jason Ernst<br>(University of California, Los Angeles) | | Jason Ernst<br>(University of California, Los Angeles) | ||
| − | | Title: | + | | Title: Computational Approaches for Deciphering the Non-coding Human Genome |
|- | |- | ||
| Wed Apr 19 | | Wed Apr 19 | ||
| − | | Yogeshwar Kelkar<br>(University of Rochester)<br>(Hosted by: The Center for Medical Genomics) | + | | Yogeshwar Kelkar<br>(University of Rochester)<br>(Hosted by: The Center for Medical Genomics with videoconference connection to Hershey room CG628) |
| − | | Title: | + | | Title: Evolutionary consequences of asexual reproduction on a wasp genome |
|- | |- | ||
| Wed Apr 26 | | Wed Apr 26 | ||
| Divyanshi Srivastava and Tarik Salameh<br>(Penn State University) | | Divyanshi Srivastava and Tarik Salameh<br>(Penn State University) | ||
| − | | Titles: | + | | Titles: Characterizing the role of hox transcription factors in specifying motor neuron identity and Machine Learning and Pharmacogenomics in Multiple Sclerosis |
|- | |- | ||
| Wed May 3 | | Wed May 3 | ||
| Yi Xing<br>(University of California, Los Angeles) | | Yi Xing<br>(University of California, Los Angeles) | ||
| − | | Title: | + | | Title: Elucidating the Complexity of the Mammalian m6A Epitranscriptome |
|- | |- | ||
| Wed May 10 | | Wed May 10 | ||
| Michael Wu<br>(Fred Hutchison Cancer Research Center ) | | Michael Wu<br>(Fred Hutchison Cancer Research Center ) | ||
| − | | Title: | + | | Title: Community level analysis of microbiome profiling studies using similarity based methods |
|- | |- | ||
| Wed May 17 | | Wed May 17 | ||
| − | | | + | | Laura Carrel<br>(Penn State Hershey Medical Center)<br>(Hosted by: The Center for Medical Genomics with videoconference connection to Hershey room CG624E) |
| − | | Title: | + | | Title: Variable expression from the inactive X chromosome: identifying tissue and individual differences and role in traits |
|- | |- | ||
| Wed May 24 | | Wed May 24 | ||
| − | | | + | | CANCELLED |
| − | | | + | | |
|} | |} | ||
| + | |||
| + | |||
| + | '''Other Semesters:''' | ||
| + | |||
| + | * [[WWWGLS: Fall 2016]] | ||
Latest revision as of 15:57, 17 May 2017
'"`UNIQ--acl-00000000-QINU`"'
Schedule for Weekly Wednesday Wartik Genomics Lecture Series and Related Events: Spring Semester 2017
Seminars are usually held on Wednesdays from 4:00-5:00 pm in the large commons area ("curved room") of 501 Wartik, unless otherwise noted. Coffee, tea, and cookies are served starting about 3:30 pm.
| Date | Presenter(s) | Topic |
|---|---|---|
| Wed Jan 18 | Siyang Zheng (Penn State University) (Hosted by: The Center for Medical Genomics with videoconference connection to Hershey room CG628) |
Title: NGS for Liquid Biopsy – Analyses of Single Circulating Tumor Cells and Extracellular Vesicles from Blood Samples of Cancer Patients |
| Wed Jan 25 | Shefali Setia and Bo Zhang (Penn State University) |
Title: Identifying genetic associations with variability in metabolic health and blood count laboratory values: Diving into the quantitative traits by leveraging longitudinal data from an EHR and Epigenetic Regulation in T-ALL by Ikaros |
| Wed Feb 1 | Marzia Cremona (Penn State University) |
Title: Functional Motif Discovery for “Omics” Curves |
| Wed Feb 8 | A. Murat Eren (The University of Chicago) (Co-hosted by The Microbiome Center) |
Title: Genome-resolved metagenomics: A perfect mixture of opportunities and challenges |
| Wed Feb 15 | Kasper Daniel Hansen (Institution: Johns Hopkins University) |
Title: DNA methylation and chromatin accessibility in the normal human brain |
| Wed Feb 22 | Thanh Le and Bruce Chen (Penn State University) |
Title: Gut Microbiome Dynamics Under Differentially Fatty Diets AND Investigating L1 Transposition with Functional Data Analysis |
| Wed Mar 1 | Ben Langmead (Johns Hopkins University) |
Title: Unlocking sequence data archives with scalable software and resources |
| Wed Mar 15 | Michael DeGiorgio (Penn State University) (Hosted by: The Center for Medical Genomics with videoconference connection to Hershey room CG628) |
Title: Uncovering regions of ancestral positive selection with ancient and modern DNA |
| Wed Mar 22 | Arjun Krishnan (Michigan State University) |
Title: "Nobody knew health and disease could be so complicated” - Some integrative data-driven insights into underlying genetic mechanisms |
| Wed Mar 29 | Naomi Yamada and Samarth Rangavittal (Penn State University) |
Title: Characterizing DNA-protein crosslinking points and binding sub-types in ChIP-exo and Assembly and analysis of Y-linked data from great apes |
| Fri Mar 31 | SPECIAL SEMINAR Marc S Greenblatt (University of Vermont College of Medicine) |
Title: Pathogenic or Not? Classifying Genetic Variants in Lynch Syndrome by Integrating In Vitro, Computational, and Other Evidence (LOCATION/TIME: 501 Wartik Lab, 3:00pm - 4:00pm) |
| Mon Apr 3 | Jean-Luc Jannink (Cornell University) (Co-hosted with Department of Plant Biology) |
Title: Genomic Selection and Purging Genetic Load in Cassava, An Outcrossing Clonally Ropagated Crop (LOCATION/TIME: 108 Wartik Lab, 12:10 - 1:10pm) |
| Wed Apr 5 | Ross Hardison (Penn State University) |
Title: Validated Systematic Integration of epigenomic data in hematopoiesis |
| Wed Apr 12 | Jason Ernst (University of California, Los Angeles) |
Title: Computational Approaches for Deciphering the Non-coding Human Genome |
| Wed Apr 19 | Yogeshwar Kelkar (University of Rochester) (Hosted by: The Center for Medical Genomics with videoconference connection to Hershey room CG628) |
Title: Evolutionary consequences of asexual reproduction on a wasp genome |
| Wed Apr 26 | Divyanshi Srivastava and Tarik Salameh (Penn State University) |
Titles: Characterizing the role of hox transcription factors in specifying motor neuron identity and Machine Learning and Pharmacogenomics in Multiple Sclerosis |
| Wed May 3 | Yi Xing (University of California, Los Angeles) |
Title: Elucidating the Complexity of the Mammalian m6A Epitranscriptome |
| Wed May 10 | Michael Wu (Fred Hutchison Cancer Research Center ) |
Title: Community level analysis of microbiome profiling studies using similarity based methods |
| Wed May 17 | Laura Carrel (Penn State Hershey Medical Center) (Hosted by: The Center for Medical Genomics with videoconference connection to Hershey room CG624E) |
Title: Variable expression from the inactive X chromosome: identifying tissue and individual differences and role in traits |
| Wed May 24 | CANCELLED |
Other Semesters:
