HLab:Main

Error creating thumbnail: Unable to save thumbnail to destination

Lab mates

Hi, the is the wiki "HOME" for Hardison Lab. Everyone is welcome to edit it. This contains our laboratory protocols and other resources.

If you are a visitor and interested in the lab projects, please go this way to the Hardison lab homepage. If you are a member of this lab, you can use your login name and password to access our database: HLab:HardisonData or view meeting notes.

Servers

CladiMo search tool for conserved motifs.

MAF browser - an interactive Flash tool for exploring MAF alignment files.

BX Browser - a mirror of the UCSC Genome Browser with tracks from Hardison lab added

Mery Browser - login required, a mirror like above with unpublished data

Resources

Laboratory Protocols

• hlab:PCR

• hlab:Transient Transfection

• hlab:Harvest of Transfection Plates

• hlab:Large-scale Plasmid Isolation

• hlab:Northern Blot

• hlab:Southern Blot

• hlab:Reverse Transcription of RNA

• hlab:Quick Genomic DNA Preparation

• hlab:Quick Gel Extraction Kit

• hlab:Transfection of L1HYTK1L Cell

• hlab:ChIP

Methods

Various techniques and approaches get re-invented frequently. This section is devoted to keep that from happening.

• Illumina post processing steps
• Workflows for processing data workflows
• Quality metrics description
• Using GEDI maps
• File sharing or transfer methods login required
• R scripts

Publications and Posters

• Workflow poster for Genome Informatics 2013
• Hlab:HardisonData login required

Computing at BX

• BX:Main, Ganglia

Wiki

• Wikipedia Cheatsheet

---

Or, if you just want to have some fun here, well, usually we are not joking during work, but check this: For Fun