User contributions
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- 16:10, 25 August 2014 (diff | hist) . . (+246) . . HLab:Qualitymetrics
- 16:10, 25 August 2014 (diff | hist) . . (+246) . . HLab:Qualitymetrics (→ChIP-seq)
- 16:05, 25 August 2014 (diff | hist) . . (-8) . . HLab:Qualitymetrics
- 15:53, 25 August 2014 (diff | hist) . . (+6) . . HLab:Gedi
- 15:52, 25 August 2014 (diff | hist) . . (+685) . . N HLab:Gedi (Created page with "The [https://apps.childrenshospital.org/clinical/research/ingber/GEDI/gedihome.htm GEDI] home page To download the program you must register. This must be run on a local machine...")
- 15:43, 25 August 2014 (diff | hist) . . (+31) . . HLab:Main (→Methods)
- 13:46, 8 August 2014 (diff | hist) . . (-3,088) . . HLab:Steps
- 14:29, 1 August 2014 (diff | hist) . . (+160) . . HLab:Qualitymetrics (→RNA-seq)
- 14:25, 1 August 2014 (diff | hist) . . (+127) . . HLab:Qualitymetrics
- 14:22, 1 August 2014 (diff | hist) . . (+12) . . HLab:Qualitymetrics
- 14:20, 1 August 2014 (diff | hist) . . (+103) . . HLab:Qualitymetrics
- 14:17, 1 August 2014 (diff | hist) . . (+366) . . HLab:Qualitymetrics
- 14:09, 1 August 2014 (diff | hist) . . (+390) . . HLab:Qualitymetrics
- 14:00, 1 August 2014 (diff | hist) . . (+113) . . N HLab:Qualitymetrics (Created page with "ChIP-seq *FRIP *NSC *RSC *Complexity RNA-seq *FRIT *Percent rRNA *Number of expressed genes *Number of spike-ins")
- 13:56, 1 August 2014 (diff | hist) . . (+53) . . HLab:Main (→Methods)
- 10:09, 23 July 2014 (diff | hist) . . (+2) . . HLab:Workflows (→BioSTAR workflows)
- 11:34, 2 June 2014 (diff | hist) . . (+85) . . HLab:Hardison Lab Meetings
- 11:19, 2 June 2014 (diff | hist) . . (+58) . . N File:MacsAndCufflinksVersions.pdf (Comparing macs vs macs2 and cufflinks 2.1 vs cufflinks 2.2) (current)
- 11:07, 2 June 2014 (diff | hist) . . (-9) . . HLab:Hardison Lab Meetings
- 10:49, 2 June 2014 (diff | hist) . . (+30) . . HLab:Hardison Lab Meetings
- 20:31, 31 October 2013 (diff | hist) . . (+44) . . HLab:Main (→Publications and Posters)
- 20:30, 31 October 2013 (diff | hist) . . (+78) . . HLab:Main
- 20:28, 31 October 2013 (diff | hist) . . (+4) . . File:GenomeInformatics2013Giardine.pdf (current)
- 20:26, 31 October 2013 (diff | hist) . . (0) . . File:GenomeInformatics2013Giardine.pdf (uploaded a new version of "File:GenomeInformatics2013Giardine.pdf": Changed mapper for RNA-seq)
- 17:21, 22 October 2013 (diff | hist) . . (+31) . . File:GenomeInformatics2013Giardine.pdf
- 17:03, 22 October 2013 (diff | hist) . . (+16) . . File:GenomeInformatics2013Giardine.pdf
- 17:02, 22 October 2013 (diff | hist) . . (+26) . . File:GenomeInformatics2013Giardine.pdf
- 16:59, 22 October 2013 (diff | hist) . . (+15) . . File:GenomeInformatics2013Giardine.pdf
- 16:55, 22 October 2013 (diff | hist) . . (+42) . . N File:GenomeInformatics2013Giardine.pdf (Poster on workflows for Genome Informatics)
- 16:49, 22 October 2013 (diff | hist) . . (+87) . . HLab:Hardison Lab Meetings (→2013)
- 09:20, 9 September 2013 (diff | hist) . . (-1) . . HLab:Main (→Servers)
- 09:20, 9 September 2013 (diff | hist) . . (-10) . . HLab:Main (→Servers)
- 17:40, 28 August 2013 (diff | hist) . . (+22) . . File:File reorganization and our database.pdf (current)
- 17:38, 28 August 2013 (diff | hist) . . (+29) . . HLab:Hardison Lab Meetings
- 17:32, 28 August 2013 (diff | hist) . . (+19) . . HLab:HardisonData
- 17:22, 28 August 2013 (diff | hist) . . (+6) . . HLab:HardisonData (→Browser and Database)
- 17:21, 28 August 2013 (diff | hist) . . (+87) . . HLab:HardisonData (→Browser)
- 17:20, 28 August 2013 (diff | hist) . . (0) . . HLab:Main
- 17:19, 28 August 2013 (diff | hist) . . (+1) . . HLab:Main
- 10:46, 28 August 2013 (diff | hist) . . (+4) . . HLab:Hardison Lab Meetings
- 10:45, 28 August 2013 (diff | hist) . . (+47) . . HLab:Hardison Lab Meetings
- 10:44, 28 August 2013 (diff | hist) . . (+5) . . File:File reorganization and our database.pdf
- 10:43, 28 August 2013 (diff | hist) . . (+18) . . File:File reorganization and our database.pdf
- 10:43, 28 August 2013 (diff | hist) . . (+51) . . File:File reorganization and our database.pdf
- 10:41, 28 August 2013 (diff | hist) . . (+61) . . N File:File reorganization and our database.pdf (lab presentation on file reorganization and the hlab database)
- 15:02, 23 August 2013 (diff | hist) . . (+16) . . HLab:Main (→Methods)
- 14:56, 23 August 2013 (diff | hist) . . (+40) . . HLab:Hardison Lab Meetings
- 14:55, 23 August 2013 (diff | hist) . . (+81) . . HLab:Hardison Lab Meetings
- 14:54, 23 August 2013 (diff | hist) . . (+78) . . File:Some basic Unix commands.pdf (current)
- 14:49, 23 August 2013 (diff | hist) . . (+42) . . N File:Some basic Unix commands.pdf (lab meeting on basic Unix commands Belinda)
- 14:41, 23 August 2013 (diff | hist) . . (-10) . . HLab:Hardison Lab Meetings
- 14:36, 23 August 2013 (diff | hist) . . (+10) . . HLab:Hardison Lab Meetings
- 14:36, 23 August 2013 (diff | hist) . . (+1) . . HLab:Hardison Lab Meetings
- 14:30, 23 August 2013 (diff | hist) . . (-2) . . HLab:Hardison Lab Meetings
- 14:28, 23 August 2013 (diff | hist) . . (+2) . . HLab:Hardison Lab Meetings
- 14:27, 23 August 2013 (diff | hist) . . (+25) . . HLab:Hardison Lab Meetings
- 14:24, 23 August 2013 (diff | hist) . . (+14) . . HLab:Hardison Lab Meetings
- 14:23, 23 August 2013 (diff | hist) . . (+27) . . HLab:Hardison Lab Meetings (→2013)
- 14:21, 23 August 2013 (diff | hist) . . (0) . . File:Labmtg040313cak.pdf (current)
- 14:20, 23 August 2013 (diff | hist) . . (+23) . . File:Labmtg040313cak.pdf
- 14:19, 23 August 2013 (diff | hist) . . (+55) . . File:Labmtg040313cak.pdf
- 14:16, 23 August 2013 (diff | hist) . . (+35) . . N File:Labmtg040313cak.pdf (Lab meeting April 3, 2013 by Cheryl)
- 14:39, 22 August 2013 (diff | hist) . . (+135) . . HLab:Hardison Lab Meetings
- 12:35, 22 August 2013 (diff | hist) . . (+64) . . N User:Giardine (Created page with "=== Belinda Giardine === giardine@bx.psu.edu<br/> 506 Wartik Lab") (current)
- 11:56, 22 August 2013 (diff | hist) . . (+3) . . HLab:Hardison Lab Meetings
- 11:54, 22 August 2013 (diff | hist) . . (+50) . . HLab:Hardison Lab Meetings
- 11:32, 22 August 2013 (diff | hist) . . (+66) . . N HLab:Hardison Lab Meetings (Created page with "==2013== Aug 28 Belinda Giardine File reorganization and database")
- 12:10, 1 August 2013 (diff | hist) . . (+144) . . HLab:HardisonData
- 12:05, 1 August 2013 (diff | hist) . . (-92) . . HLab:Main
- 12:04, 1 August 2013 (diff | hist) . . (-26) . . HLab:Main (→Wiki)
- 12:03, 1 August 2013 (diff | hist) . . (-143) . . HLab:Main
- 12:02, 1 August 2013 (diff | hist) . . (-205) . . HLab:Main
- 11:53, 1 August 2013 (diff | hist) . . (+114) . . HLab:Main (→Servers)
- 11:51, 1 August 2013 (diff | hist) . . (+126) . . HLab:Main (→Servers)
- 11:49, 1 August 2013 (diff | hist) . . (+38) . . HLab:Main (→Computing at BX)
- 11:47, 1 August 2013 (diff | hist) . . (-37) . . HLab:Main (→Computing at BX)
- 11:42, 1 August 2013 (diff | hist) . . (-171) . . HLab:Main (→Servers)
- 11:26, 1 August 2013 (diff | hist) . . (+2,183) . . N HLab:Workflows (Created page with "=Hardison lab workflows= ==Purpose== To make datasets consistant and comparable the data is processed through uniform workflows. ==Galaxy workflows== There are workflows set ...")
- 11:09, 1 August 2013 (diff | hist) . . (+50) . . HLab:Main (→Methods)
- 13:38, 3 December 2012 (diff | hist) . . (+1,645) . . HLab:Steps
- 13:11, 3 December 2012 (diff | hist) . . (-38) . . HLab:Steps (→Bcl – qseq - fastq)
- 13:06, 3 December 2012 (diff | hist) . . (+1,625) . . HLab:Steps (→Demultiplexing)
- 12:39, 3 December 2012 (diff | hist) . . (+1,338) . . N HLab:Steps (Created page with "== Bcl – qseq - fastq == ===1. Get run folder name=== from Cheryl. (RUN_NAME) ===2. Create RUN_NAME directory=== under /afs/bx.psu.edu/depot/data/hardison_lab/illumina/bcl_to...")
- 12:21, 3 December 2012 (diff | hist) . . (+5) . . HLab:Main (→Methods)
- 12:20, 3 December 2012 (diff | hist) . . (+37) . . HLab:Main (→Methods)
- 16:16, 19 November 2010 (diff | hist) . . (+429) . . Nm Variome:Hg18-6 (Created page with 'Category:Genome Annotation [http://dev.genome-browser.bx.psu.edu/cgi-bin/hgTracks?db=hg18&wikiTrack=pack&position=chr16:162981-162990 hg18 chr16:162,981-162,990] <…') (current)
- 14:29, 19 November 2010 (diff | hist) . . (+9,013) . . m Variome:Hg18-5 (current)
- 14:26, 19 November 2010 (diff | hist) . . (+401) . . Nm Variome:Hg18-5 (Created page with 'Category:Genome Annotation [http://dev.genome-browser.bx.psu.edu/cgi-bin/hgTracks?db=hg18&wikiTrack=pack&position=chr16:162986-162986 hg18 chr16:162,986-162,986] <…')
- 14:24, 19 November 2010 (diff | hist) . . (+8,973) . . m Variome:Hg18-4 (current)
- 14:21, 19 November 2010 (diff | hist) . . (+441) . . Nm Variome:Hg18-4 (Created page with 'Category:Genome Annotation [http://dev.genome-browser.bx.psu.edu/cgi-bin/hgTracks?db=hg18&wikiTrack=pack&position=chr16:162986-162986 hg18 chr16:162,986-162,986] <…')
- 12:26, 19 November 2010 (diff | hist) . . (+344) . . Nm Variome:Hg18-1 (Created page with 'Category:Genome Annotation [http://dev.genome-browser.bx.psu.edu/cgi-bin/hgTracks?db=hg18&wikiTrack=pack&position=chr16:162986-162986 hg18 chr16:162,986-162,986] <…') (current)
- 14:47, 18 November 2010 (diff | hist) . . (+1,479) . . Nm UCSCGeneAnnotation:Hg18-7 (Created page with 'Category:Genome Annotation Canonical gene details [http://dev.genome-browser.bx.psu.edu/cgi-bin/hgGene?hgg_chrom=none&org=Human&db=0&hgg_gene=uc002cfv.2 HBA2 uc002cfv.2]<BR> …') (current)
- 10:26, 16 November 2010 (diff | hist) . . (+7) . . m GenomeAnnotation:Hg18-5 (current)
- 10:20, 16 November 2010 (diff | hist) . . (+292) . . Nm GenomeAnnotation:Hg18-5 (Created page with 'Category:Genome Annotation [http://dev.genome-browser.bx.psu.edu/cgi-bin/hgTracks?db=hg18&wikiTrack=pack&position=chr11:5204736-5204828 hg18 chr11:5,204,736-5,204,828] &…')
- 11:23, 10 November 2010 (diff | hist) . . (+309) . . Nm GenomeAnnotation:Hg18-3 (Created page with 'Category:Genome Annotation [http://dev.genome-browser.bx.psu.edu/cgi-bin/hgTracks?db=hg18&wikiTrack=pack&position=chr10:90997300-90997350 hg18 chr10:90,997,300-90,997,350]&nb…') (current)
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